CritusKB - Knowledge Base for Transcriptome of Citrus Interactome

Citrus Transcriptome: Sequencing, Assembly and Annotation Status

Reference transcriptome status

Total number of transcripts:	49,564
Total size of transcripts:	73,991,731bp
GC%:	41.06
Longest transcript:	16,810bp
Transcripts > 1kb:	29,599
Transcripts > 10kb:	45
Mean transcript size:	1,493bp
Median transcript size:	1,241bp

Annotation Status

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Percentage of Sequences Annotated

Number of GO-terms for Sequences

Number of Sequences and Length

Data Distribution

Analysis Progress

Data Distribution - Pie Chart

BLAST - Species Distribution

TOP BLAST - Top-Hit Species Distribution

InterProScan Results

InterProScan Sites Distribution

InterProScan Repeats Distribution

InterProScan Domains Distribution

InterProScan Families Distribution

GO Distribution - Biological Process

GO Distribution - Cellular Component

GO Distribution - Molecular Function

Enzyme Code Distribution

Transcriptome Completeness

Summary

C:89.5%[S:69.4%,D:20.1%],F:5.2%,M:5.3%,n:1,440

1,289 Complete BUSCOs (C)

999 Complete and single-copy BUSCOs (S)

290 Complete and duplicated BUSCOs (D)

75 Fragmented BUSCOs (F)

76 Missing BUSCOs (M)

1,440 Total BUSCO groups searched

COGs/KOGs